STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000018782annotation not available (155 aa)    
Predicted Functional Partners:
nthl1
Endonuclease III-like protein 1 isoform X1.
  
 0.911
pcna
Proliferating cell nuclear antigen.
  
 0.888
ENSSRHP00000043706
annotation not available
    
 0.783
ENSSRHP00000085249
annotation not available
    
 0.783
Ogg1
N-glycosylase/DNA lyase.
  
 0.760
ENSSRHP00000102437
8-oxoguanine DNA glycosylase.
  
 0.760
ENSSRHP00000067947
Ligase I, DNA, ATP-dependent.
  
 
 0.749
lig1
DNA ligase 1 isoform X1.
  
 
 0.749
ENSSRHP00000047318
Probable endonuclease 4.
    
 
 0.745
ENSSRHP00000053841
Si:ch211-141o9.10.
    
 
 0.745
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.