STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107712996Tudor domain-containing protein 3-like isoform X1. (752 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia group M protein.
    
 0.998
ENSSRHP00000017445
WRN RecQ like helicase.
   
 0.988
TOP3B
DNA topoisomerase 3-beta-1-like.
    
 0.988
top3b
DNA topoisomerase 3-beta-1.
    
 0.988
rmi2
RecQ-mediated genome instability protein 2.
    
 0.982
ENSSRHP00000036990
annotation not available
    
 0.960
LOC107737704
DNA topoisomerase 3-alpha-like.
    
 0.960
LOC107720051
DNA topoisomerase 3-alpha-like.
    
 0.960
LOC107715230
Bloom syndrome protein homolog isoform X1.
   
 0.920
Recql4
ATP-dependent DNA helicase Q4.
   
 0.920
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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