STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1077431622-hydroxyacyl-CoA lyase 1-like. (580 aa)    
Predicted Functional Partners:
LOC107741296
Malate synthase, glyoxysomal-like.
  
 
 0.976
COX1
Cytochrome c oxidase subunit 1.
    
 0.935
LOC107715034
Citrate synthase, mitochondrial-like.
    
 0.933
ENSSRHP00000086113
Citrate synthase.
    
 0.933
COX2
Cytochrome c oxidase subunit II.
    
 0.932
LOC107758241
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like.
  
 
 0.929
Bckdha
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial.
  
 
 0.929
ENSSRHP00000042962
Alcohol dehydrogenase iron containing 1.
    
 0.927
adhfe1
Hydroxyacid-oxoacid transhydrogenase, mitochondrial.
    
 0.927
COX3
Cytochrome c oxidase subunit III.
    
 0.919
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.