STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000021370Transmembrane protein 151A. (471 aa)    
Predicted Functional Partners:
ENSSRHP00000028531
Ganglioside-induced differentiation-associated protein 1-like 1.
   
  
 0.566
LOC107707014
Ganglioside-induced differentiation-associated protein 1-like 1.
   
  
 0.566
ENSSRHP00000009435
Uncharacterized protein LOC107736444.
      
 0.533
ENSSRHP00000098544
Uncharacterized protein LOC107733260.
      
 0.533
LOC107726686
RNA-binding protein 8A-like.
      
 0.521
ENSSRHP00000037025
RNA binding motif protein 8A.
      
 0.521
KCNK12-2
Potassium channel subfamily K member 12-like.
  
    0.421
ENSSRHP00000099049
Potassium channel, subfamily K, member 12 like.
  
    0.404
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.