STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107718701BTB/POZ domain-containing protein KCTD9-like. (389 aa)    
Predicted Functional Partners:
ENSSRHP00000019554
DNA topoisomerase 2-beta-like.
   
 
 0.788
ENSSRHP00000030882
DNA topoisomerase 2-alpha-like.
   
 
 0.788
LOC107717721
DNA topoisomerase 2-beta-like isoform X1.
   
 
 0.788
LOC107724810
Cullin-3-B.
    
 
 0.670
ENSSRHP00000059281
BTB/POZ domain-containing protein KCTD14-like.
      
0.619
ENSSRHP00000043198
U-box domain containing 5.
      
 0.614
ENSSRHP00000040657
Cullin 3b.
    
 
 0.574
ENSSRHP00000100315
annotation not available
    
 
 0.574
ENSSRHP00000013984
Ring finger protein 24.
      
 0.520
ENSSRHP00000035991
RING finger protein 24-like isoform X1.
      
 0.520
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.