STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000024055BBSome interacting protein 1. (80 aa)    
Predicted Functional Partners:
LOC107756470
Bardet-Biedl syndrome 7 protein homolog.
    
 
 0.870
LOC107741577
Bardet-Biedl syndrome 7 protein homolog.
    
 
 0.870
TTC8
Tetratricopeptide repeat domain 8.
    
 
 0.865
ENSSRHP00000032670
annotation not available
    
 
 0.865
ENSSRHP00000040357
Bardet-Biedl syndrome 1 protein-like.
    
 
 0.861
Bbs2
Bardet-Biedl syndrome 2 protein isoform X1.
    
 
 0.801
ENSSRHP00000085598
Bardet-Biedl syndrome 2.
    
 
 0.801
ENSSRHP00000051493
Bardet-Biedl syndrome 9 protein.
    
 
 0.773
ENSSRHP00000051495
Bardet-Biedl syndrome 9.
    
 
 0.773
ENSSRHP00000072811
Bardet-Biedl syndrome 9.
    
 
 0.773
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.