STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107714964Terminal nucleotidyltransferase 5A/B. (389 aa)    
Predicted Functional Partners:
ENSSRHP00000016511
Zinc finger HIT-type containing 6.
    
 
 0.535
ENSSRHP00000025111
annotation not available
    
 
 0.490
bccip
BRCA2 and CDKN1A-interacting protein.
    
 
 0.490
ENSSRHP00000089436
BRCA2 and CDKN1A interacting protein.
    
 
 0.490
PLK4
Serine/threonine-protein kinase PLK4.
    
 
 0.438
ENSSRHP00000060762
Serine/threonine-protein kinase PLK4-like.
    
 
 0.438
glt8d2
Glycosyltransferase 8 domain-containing protein 2.
      
 0.428
ENSSRHP00000031009
annotation not available
    
 
 0.402
LOC107729168
Potassium voltage-gated channel Eag-related subfamily H member 4.
      
 0.402
LOC107755566
Potassium voltage-gated channel Eag-related subfamily H member 4.
      
 0.402
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.