STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107741903MKI67 FHA domain-interacting nucleolar phosphoprotein. (266 aa)    
Predicted Functional Partners:
Brix1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.999
ENSSRHP00000036058
Ribosomal RNA processing 1.
   
 
 0.999
LOC107734245
Ribosomal L1 domain-containing protein 1-like.
   
 
 0.999
ftsj3
AdoMet-dependent rRNA methyltransferase SPB1.
   
 
 0.999
rsl1d1
Ribosomal L1 domain-containing protein 1.
   
 
 0.999
znf593
Bud site selection protein 20.
   
 
 0.999
ENSSRHP00000095783
EBNA1 binding protein 2.
   
 
 0.999
ENSSRHP00000097207
NOC3-like DNA replication regulator.
   
 
 0.999
LOC107705796
60S ribosome subunit biogenesis protein NIP7 homolog.
   
 
 0.998
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.998
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.