STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107741249Ran-specific GTPase-activating protein-like isoform X1. (216 aa)    
Predicted Functional Partners:
LOC107742602
GTP-binding nuclear protein Ran.
   
 0.981
ENSSRHP00000015038
Adhesion G-protein coupled receptor D1-like.
   
 0.981
ENSSRHP00000038672
Adhesion G-protein coupled receptor D1-like.
   
 0.981
ENSSRHP00000062309
RAN, member RAS oncogene family.
   
 0.981
LOC107745514
Ran GTPase-activating protein 1-like isoform X1.
   
 0.976
ENSSRHP00000053744
RAN GTPase activating protein 1a.
   
 0.976
ENSSRHP00000036083
Ran GTPase activating protein 1b.
   
 0.967
ENSSRHP00000047870
Ran GTPase-activating protein 1-like.
   
 0.967
NUP155
Nuclear pore complex protein Nup155-like.
   
 0.951
LOC107731094
Nuclear pore complex protein Nup54-like.
   
 0.949
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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