STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107710784Protein RER1-like isoform X1. (197 aa)    
Predicted Functional Partners:
ENSSRHP00000030575
Surfeit locus protein 4 isoform X1.
   
 
 0.800
ENSSRHP00000086867
Surfeit locus protein 4-like.
   
 
 0.800
LOC107726621
Translocation protein SEC63 homolog isoform X1.
      
 0.688
LOC107726458
Translocation protein SEC63 homolog.
      
 0.688
LOC107737028
Prolactin regulatory element-binding protein-like.
   
 
 0.673
ENSSRHP00000069902
Prolactin regulatory element-binding protein-like.
   
 
 0.673
LOC107741458
PC-esterase domain-containing protein 1A-like isoform X1.
      
 0.664
ENSSRHP00000016080
Coatomer protein complex, subunit epsilon.
   
 
 0.653
LOC107709006
Coatomer subunit epsilon-like.
   
 
 0.653
LOC107738120
Coatomer subunit beta' isoform X1.
    
 
 0.649
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.