STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107746572Tetraspanin-18-like. (260 aa)    
Predicted Functional Partners:
txnl4b
Thioredoxin-like protein 4B.
      
 0.614
LOC107742410
CD180 antigen-like.
      
 0.501
GHITM
Growth hormone-inducible transmembrane protein-like isoform X1.
      
 0.422
ENSSRHP00000098000
Growth hormone-inducible transmembrane protein-like isoform X1.
      
 0.422
LOC107723742
CD63 antigen-like.
     
0.405
ENSSRHP00000096111
CD63 molecule.
     
0.405
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.