STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107729067Teashirt homolog 2-like. (1022 aa)    
Predicted Functional Partners:
exd1
Exonuclease 3'-5' domain-containing protein 1.
      
 0.688
ENSSRHP00000098837
annotation not available
  
     0.463
LOC107729485
Serine/threonine-protein kinase SMG1-like.
      
 0.410
ENSSRHP00000003752
annotation not available
    
 0.406
ENSSRHP00000025319
Homeobox protein Meis2-like.
    
 0.406
ENSSRHP00000025320
Homeobox protein Meis2-like.
    
 0.406
ENSSRHP00000049843
Homeobox protein Meis2-like.
    
 0.406
LOC107714182
Tsukushi (leucine-rich repeat-containing protein 54).
      
 0.404
ENSSRHP00000046698
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
      
 0.404
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.