STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000034195Transmembrane protein 151A. (473 aa)    
Predicted Functional Partners:
ENSSRHP00000046512
Caldesmon 1b.
      
 0.676
ENSSRHP00000052018
Ankyrin repeat and death domain-containing protein 1A-like.
      
 0.619
Ankdd1a
Ankyrin repeat and death domain-containing protein 1A.
      
 0.619
LOC107723130
Sterile alpha motif domain-containing protein 10-like.
      
 0.617
ENSSRHP00000059229
Sterile alpha motif domain-containing protein 10-like isoform X1.
      
 0.617
ENSSRHP00000010677
annotation not available
      
 0.583
LOC107735096
Transmembrane protein 119-like.
      
 0.583
ENSSRHP00000031374
Transmembrane protein 119b.
      
 0.583
ENSSRHP00000039443
Golgi integral membrane protein 4-like.
      
 0.533
ENSSRHP00000067801
Probable serine/threonine-protein kinase kinX.
      
 0.533
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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