STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000034248annotation not available (167 aa)    
Predicted Functional Partners:
ENSSRHP00000052724
Thyroid hormone receptor interactor 12.
   
 
 0.822
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
 0.822
uba52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.729
ENSSRHP00000093444
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.729
ENSSRHP00000002809
annotation not available
   
 0.677
LOC107717644
Small subunit ribosomal protein S30e.
   
 0.677
LOC107718759
Small subunit ribosomal protein S30e.
   
 0.677
LOC107720608
Small subunit ribosomal protein S30e.
   
 0.677
LOC107752103
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.638
LOC107752103-2
ubiquitin-40S ribosomal protein S27a.
   
 0.638
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.