STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107745462Cyclic AMP-dependent transcription factor ATF-7-like. (497 aa)    
Predicted Functional Partners:
LOC107735627
Transcription factor AP-1-like.
   
 0.836
LOC107721038
Transcription factor AP-1-like isoform X1.
   
 0.836
ENSSRHP00000051858
Transcription factor AP-1-like.
   
0.836
ENSSRHP00000094677
Transcription factor AP-1-like.
   
 0.836
LOC107719360
Proto-oncogene protein c-fos.
    
 0.758
LOC107742716
Proto-oncogene protein c-fos.
    
0.758
ENSSRHP00000078597
Mitogen-activated protein kinase 9.
    
 0.731
ENSSRHP00000088406
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.731
LOC107709004
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.718
LOC107707207
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
    
 0.718
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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