STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107713739Sciellin-like isoform X1. (509 aa)    
Predicted Functional Partners:
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
   
 0.718
ENSSRHP00000028933
ATP-binding cassette, subfamily A (ABC1), member 12.
   
  
 0.531
ENSSRHP00000046756
LOW QUALITY PROTEIN: uncharacterized protein LOC107714367.
   
  
 0.531
LOC107754503
Protein FAM196B-like isoform X1.
    
 
 0.531
ENSSRHP00000018992
annotation not available
      
 0.526
LOC107746591
RING finger protein 219-like isoform X1.
      
 0.526
LOC107715799
Protein FAM212A-like.
      
 0.508
LOC107723929
Protein FAM212A-like.
      
 0.508
LOC107718245
Protein FAM212A-like isoform X1.
      
 0.508
LOC107708110
Protein FAM212A-like.
      
 0.508
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.