STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000040889Zgc:112294. (210 aa)    
Predicted Functional Partners:
ENSSRHP00000084498
Coiled-coil and C2 domain containing 2A.
    
 
 0.649
LOC107730620
Intraflagellar transport protein 52 homolog isoform X1.
      
 0.611
LOC107728421
Transmembrane protein 231.
    
 
 0.564
tmem231
Transmembrane protein 231.
    
 
 0.564
ENSSRHP00000040357
Bardet-Biedl syndrome 1 protein-like.
   
  
 0.531
ENSSRHP00000097680
Tubulin tyrosine ligase-like family, member 9.
      
 0.531
ENSSRHP00000039595
Nephronophthisis 1.
      
 0.530
ENSSRHP00000064616
Nephrocystin-1-like isoform X1.
      
 0.530
LOC107754962
B9 domain-containing protein 2.
    
 
 0.529
LOC107706523
B9 domain-containing protein 2-like isoform X1.
    
 
 0.529
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.