STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107755916R-spondin-2-like. (248 aa)    
Predicted Functional Partners:
LOC107745941
E3 ubiquitin-protein ligase RNF43-like.
   
 0.993
ENSSRHP00000014931
E3 ubiquitin-protein ligase ZNRF3.
   
 0.982
ENSSRHP00000022024
E3 ubiquitin-protein ligase ZNRF3-like isoform X1.
   
 0.982
LOC107755070
Leucine-rich repeat-containing G-protein coupled receptor 4-like isoform X1.
   
 0.976
ENSSRHP00000064797
Leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1.
   
 0.976
LOC107746507
Leucine-rich repeat-containing G protein-coupled receptor 6.
    
 0.934
ENSSRHP00000056270
annotation not available
   
 0.934
ENSSRHP00000000490
Si:ch211-81a5.1.
   
 0.663
ENSSRHP00000007104
E3 ubiquitin-protein ligase RNF115-like.
   
 0.663
ENSSRHP00000019650
RING finger protein 215-like.
   
 0.663
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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