STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000044047Sorting nexin 22. (225 aa)    
Predicted Functional Partners:
LOC107744115
Sorting nexin-24-like isoform X1.
    
  
0.579
LOC107713362
Sorting nexin-24-like.
    
  
0.579
ENSSRHP00000023940
annotation not available
      
 0.571
WDFY4
WDFY family member 4.
      
 0.571
ENSSRHP00000044108
Nudix (nucleoside diphosphate linked moiety X)-type motif 17.
      
 0.532
ENSSRHP00000094393
LOW QUALITY PROTEIN: nucleoside diphosphate-linked moiety X motif 17-like.
      
 0.532
LOC107737668
Pituitary tumor-transforming gene 1 protein-interacting protein-like.
      
 0.523
ENSSRHP00000002995
annotation not available
      
 0.523
ENSSRHP00000100278
Uncharacterized protein LOC107744004.
      
 0.523
ENSSRHP00000073985
Formin binding protein 1a.
    
 
 0.516
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.