STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb8osProtein archease isoform X1. (162 aa)    
Predicted Functional Partners:
rtcb
TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase).
  
 0.964
ENSSRHP00000060590
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
  
 0.964
LOC107726609
ATP-dependent RNA helicase DDX1.
     
 0.796
LOC107726454
ATP-dependent RNA helicase DDX1-like.
     
 0.796
LOC107749537
Protein FAM98B-like isoform X1.
    
 0.723
ENSSRHP00000001025
Eukaryotic peptide chain release factor subunit 1-like.
  
    0.707
ENSSRHP00000011507
Eukaryotic translation termination factor 1a.
  
    0.707
LOC107720712
Eukaryotic peptide chain release factor subunit 1.
  
    0.707
LOC107754487
Eukaryotic peptide chain release factor subunit 1-like isoform X1.
  
    0.707
LOC107751811
UPF0568 protein C14orf166 homolog.
     
 0.620
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.