STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107734183Trinucleotide repeat-containing gene 6B protein-like isoform X1. (1994 aa)    
Predicted Functional Partners:
ENSSRHP00000016464
GRB10 interacting GYF protein 1a.
    
 
 0.670
ENSSRHP00000023366
GRB10 interacting GYF protein 2.
    
 
 0.670
ENSSRHP00000063977
GRB10 interacting GYF protein 1b.
    
 
 0.670
ENSSRHP00000075121
PERQ amino acid-rich with GYF domain-containing protein 1-like isoform X1.
    
 
 0.670
ENSSRHP00000095328
GRB10 interacting GYF protein 1a.
    
 
 0.670
dicer1
Endoribonuclease Dicer.
    
 
 0.601
ENSSRHP00000062379
Endoribonuclease Dicer-like.
    
 
 0.601
ENSSRHP00000003956
annotation not available
    
 0.578
ENSSRHP00000006411
Protein argonaute-3-like.
    
 0.578
ENSSRHP00000028509
Argonaute RISC component 4.
    
 0.578
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.