STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubl4aUbiquitin-like protein 4A. (157 aa)    
Predicted Functional Partners:
ENSSRHP00000010810
annotation not available
   
 0.988
LOC107730900
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.988
ENSSRHP00000072183
Ubiquitin-conjugating enzyme E2 variant 1-like.
   
 0.988
ENSSRHP00000059366
Histone H2A deubiquitinase MYSM1-like.
   
 0.961
ENSSRHP00000095660
Myb-like, SWIRM and MPN domains 1.
   
 0.961
LOC107732947
UBX domain-containing protein 7-like.
    
 0.956
LOC107710610
UBX domain-containing protein 7-like.
    
 0.956
ENSSRHP00000052724
Thyroid hormone receptor interactor 12.
   
 0.954
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.954
LOC107709282
Large proline-rich protein BAG6.
    
 0.946
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.