STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000047600Probable cysteine--tRNA ligase, mitochondrial isoform X1. (577 aa)    
Predicted Functional Partners:
ENSSRHP00000060584
Elongation factor 1-gamma-like.
   
 0.950
Eef1g
Elongation factor 1-gamma.
   
 0.950
LOC107746821
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like.
  
 
 0.937
ENSSRHP00000080724
Phosphatidylinositol glycan anchor biosynthesis, class L.
  
 
 0.937
LOC107724337
Tyrosine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.875
ENSSRHP00000065113
Tyrosine--tRNA ligase, cytoplasmic-like.
  
 
 0.875
LOC107723495
Valine--tRNA ligase-like isoform X1.
  
 0.856
ENSSRHP00000078134
Valine--tRNA ligase-like.
  
 0.856
mars1
Methionine--tRNA ligase, cytoplasmic.
  
 0.843
ENSSRHP00000019122
Methionine--tRNA ligase, cytoplasmic-like.
  
 0.843
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.