STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107706236Mediator of RNA polymerase II transcription subunit 30. (171 aa)    
Predicted Functional Partners:
med1
Mediator of RNA polymerase II transcription subunit 1.
   
 0.999
med20
Mediator of RNA polymerase II transcription subunit 20.
    
 0.999
Med23
Mediator of RNA polymerase II transcription subunit 23.
   
 0.999
med9
Mediator of RNA polymerase II transcription subunit 9.
    
 0.997
med17
Mediator of RNA polymerase II transcription subunit 17.
   
 0.992
ENSSRHP00000023599
Mediator of RNA polymerase II transcription subunit 17-like.
   
 0.992
LOC107714426
Mediator of RNA polymerase II transcription subunit 18 isoform X1.
   
 0.991
LOC107720175
Mediator of RNA polymerase II transcription subunit 18-like.
   
 0.991
LOC107725311
Mediator of RNA polymerase II transcription subunit 27-like.
   
 0.991
LOC107757301
Mediator of RNA polymerase II transcription subunit 27.
   
 0.991
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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