STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000048838annotation not available (138 aa)    
Predicted Functional Partners:
mrps10
28S ribosomal protein S10, mitochondrial isoform X1.
   
 0.914
LOC107719723
Mitotic-spindle organizing protein 1-like.
   
 0.907
mzt1
Mitotic-spindle organizing protein 1.
   
 0.907
ENSSRHP00000063523
Gamma-tubulin complex component 5-like.
    
 0.891
tubgcp5
Gamma-tubulin complex component 5.
    
 0.891
Tubgcp6
Gamma-tubulin complex component 6.
     
 0.886
LOC107715285
28S ribosomal protein S12, mitochondrial-like.
  
 0.885
LOC107756133
28S ribosomal protein S12, mitochondrial-like.
  
 0.885
RPS20
Small subunit ribosomal protein S20e.
   
 0.873
RPS20-2
Small subunit ribosomal protein S20e.
   
 0.873
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.