STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000049126annotation not available (230 aa)    
Predicted Functional Partners:
LOC107736477
Rab-like protein 2A.
   
    0.669
LOC107710389
Rab-like protein 2A.
   
    0.669
ENSSRHP00000073192
Iron-sulfur cluster assembly 1.
      
 0.643
isca1
Iron-sulfur cluster assembly 1 homolog, mitochondrial.
      
 0.643
ENSSRHP00000028321
annotation not available
      
 0.567
ENSSRHP00000049123
annotation not available
      
 0.567
ENSSRHP00000077519
G-protein coupled receptor 54-like.
      
 0.521
wdr89
WD repeat-containing protein 89.
      
 0.515
LOC107732331
Krueppel-like factor 5 isoform X1.
      
 0.505
LOC107726780
Krueppel-like factor 5 isoform X1.
      
 0.505
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.