STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000050032Protein FAM192A-like. (95 aa)    
Predicted Functional Partners:
LOC107717065
Homeobox protein goosecoid-like.
    
   0.883
LOC107750880
Homeobox protein goosecoid.
    
   0.883
ENSSRHP00000035055
Cactin-like.
    
 
 0.785
Cactin
LOW QUALITY PROTEIN: cactin.
    
 
 0.785
CDC5L
Cell division cycle 5-like protein.
    
   0.780
LOC107743637
Pre-mRNA-processing-splicing factor 8.
    
   0.780
ENSSRHP00000056853
pre-mRNA processing factor 8.
    
   0.780
ENSSRHP00000070588
CDC5 cell division cycle 5-like (S. pombe).
    
   0.780
LOC107727296
Proteasome activator complex subunit 3-like isoform X1.
    
 
 0.774
LOC107706898
Proteasome activator complex subunit 3-like.
    
 
 0.774
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.