STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107749834Rab9 effector protein with kelch motifs-like. (538 aa)    
Predicted Functional Partners:
ENSSRHP00000006163
Zinc finger protein 367.
    
 
 0.620
ENSSRHP00000020987
Developmentally-regulated GTP-binding protein 1.
    
   0.575
LOC107713382
Developmentally-regulated GTP-binding protein 1-like.
    
   0.575
ENSSRHP00000000097
DNA polymerase epsilon subunit 2-like.
    
   0.560
ENSSRHP00000006084
UPF0235 protein C15orf40 homolog.
    
   0.560
LOC107715034
Citrate synthase, mitochondrial-like.
    
   0.560
ENSSRHP00000045796
Zgc:193812.
    
   0.560
ENSSRHP00000051662
Polymerase (DNA directed), epsilon 2.
    
   0.560
ENSSRHP00000086113
Citrate synthase.
    
   0.560
LOC107746415
UPF0428 protein CXorf56 homolog.
    
   0.560
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.