STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000050776General transcription factor IIH, polypeptide 2. (168 aa)    
Predicted Functional Partners:
LOC107705543
TFIIH basal transcription factor complex helicase XPB subunit-like isoform X1.
    
 0.983
ENSSRHP00000019037
Excision repair cross-complementation group 3.
    
 0.983
ENSSRHP00000023282
General transcription factor IIH, polypeptide 4.
   
 0.983
gtf2h4
Transcription initiation factor TFIIH subunit 4.
   
 0.983
LOC107743694
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.983
LOC107718279
TFIIH basal transcription factor complex helicase XPD subunit-like.
    
 0.983
LOC107720191
Cyclin-H-like.
   
 0.980
LOC107753181
Cyclin-H-like isoform X1.
   
 0.980
ENSSRHP00000005697
Transcription initiation factor TFIIB.
    
 0.978
LOC107718116
Transcription initiation factor IIB-like.
    
 0.978
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.