STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000050966Zinc finger DHHC-type containing 16a. (243 aa)    
Predicted Functional Partners:
LOC107725794
Cytoskeleton-associated protein 4.
   
 
 0.628
CLSPN
Claspin-like isoform X1.
   
 
 0.552
LOC107739372
Probable palmitoyltransferase ZDHHC21 isoform X1.
     
0.536
ZDHHC21
Probable palmitoyltransferase ZDHHC21.
     
0.536
Timeless
Protein timeless homolog.
   
 
 0.535
ENSSRHP00000016982
annotation not available
      
 0.528
LOC107744125
Spindle and kinetochore-associated protein 1-like.
   
 
 0.503
LOC107713381
Spindle and kinetochore-associated protein 1.
   
 
 0.503
LOC107734479
Spindle and kinetochore-associated protein 2.
   
 
 0.498
LOC107728893
Spindle and kinetochore-associated protein 2-like isoform X1.
   
 
 0.498
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.