STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000056195Probable helicase with zinc finger domain. (1720 aa)    
Predicted Functional Partners:
ENSSRHP00000096596
Roquin-2-like.
   
 
 0.716
ENSSRHP00000102217
Ring finger and CCCH-type domains 2.
   
 
 0.716
ENSSRHP00000054983
Opticin.
      
 0.689
ENSSRHP00000029081
PHD finger protein 3-like.
   
  
 0.679
LOC107726593
PHD finger protein 3-like isoform X1.
   
  
 0.679
ENSSRHP00000010619
annotation not available
   
 
 0.677
ENSSRHP00000037580
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 
 0.677
ENSSRHP00000097440
CCR4-NOT transcription complex subunit 1-like.
   
 
 0.677
Smyd3
[histone H3]-lysine4/36 N-trimethyltransferase SMYD.
    
 0.672
ENSSRHP00000088361
SET and MYND domain containing 3.
    
 0.672
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.