STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107712622Casein kinase II subunit alpha'-like. (369 aa)    
Predicted Functional Partners:
SUPT16H
LOW QUALITY PROTEIN: FACT complex subunit SPT16-like.
   
 0.919
LOC107711319
Casein kinase II subunit beta.
   
 0.909
LOC107711319-2
Casein kinase II subunit beta.
   
 0.909
LOC107721685
Ribosomal RNA-processing protein 7 homolog A-like.
   
 0.888
ENSSRHP00000076794
Nucleolar protein 6 (RNA-associated).
    
 0.791
nol6
U3 small nucleolar RNA-associated protein 22.
    
 0.791
ENSSRHP00000069876
Structure specific recognition protein 1a.
    
 0.781
LOC107737799
Structure-specific recognition protein 1.
    
 0.781
ENSSRHP00000097793
FACT complex subunit SSRP1-like isoform X1.
    
 0.781
ENSSRHP00000099681
Structure specific recognition protein 1b.
    
 0.781
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.