STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000059387Plectin-like. (4576 aa)    
Predicted Functional Partners:
ENSSRHP00000082789
LOW QUALITY PROTEIN: integrin beta-4-like.
  
 0.895
ENSSRHP00000086448
Integrin beta-4-like isoform X1.
  
 0.894
ENSSRHP00000104758
Nesprin-3-like isoform X1.
    
 0.705
ENSSRHP00000047343
Junction plakoglobin a.
   
 0.664
LOC107753847
Junction plakoglobin-like.
   
 0.664
LOC107723451
Desmocollin-2-like.
   
 0.655
LOC107746002
Desmocollin-2-like isoform X1.
   
 0.655
ENSSRHP00000019742
Junction plakoglobin-like isoform X1.
   
 0.650
ENSSRHP00000104086
Junction plakoglobin b.
   
 0.650
ENSSRHP00000014042
Sad1 and UNC84 domain containing 1.
    
 0.629
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.