STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107753914Negative elongation factor A-like. (552 aa)    
Predicted Functional Partners:
ENSSRHP00000039793
Negative elongation factor B-like.
   
 0.982
LOC107757973
Negative elongation factor B-like.
   
 0.982
LOC107729768
Negative elongation factor C/D isoform X1.
    
 0.981
ENSSRHP00000078613
Negative elongation factor C/D-like.
    
 0.981
ENSSRHP00000022541
Negative elongation factor E-like.
   
 0.976
ENSSRHP00000032713
Negative elongation factor E-like.
   
 0.976
ENSSRHP00000022606
Transcription elongation factor SPT5.
   
 0.969
supt5h
Transcription elongation factor SPT5.
   
 0.969
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
  0.939
POLR2B-2
DNA-directed RNA polymerase II subunit RPB2-like.
    
  0.939
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.