STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000060050Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1. (3488 aa)    
Predicted Functional Partners:
ripk4
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.750
ENSSRHP00000089805
Receptor-interacting serine-threonine kinase 4.
   
 0.750
ENSSRHP00000040412
annotation not available
    
0.734
ENSSRHP00000049869
Tenascin-like.
    
 0.734
ENSSRHP00000040435
Zinc finger protein ZIC 1-like.
    
 0.721
ENSSRHP00000099173
Zinc finger protein ZIC 1-like.
    
 0.721
ENSSRHP00000009729
Tenascin-R-like.
    
0.707
LOC107722078
Tenascin-N-like isoform X1.
    
0.707
ENSSRHP00000043498
Tenascin R (restrictin, janusin).
    
0.707
LOC107726927
tenascin-N-like.
    
0.707
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.