STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000062702Zinc finger protein 395-like. (395 aa)    
Predicted Functional Partners:
LOC107741928
BRCA1-associated RING domain protein 1-like isoform X1.
    
 0.709
ENSSRHP00000002809
annotation not available
    
  0.689
LOC107717644
Small subunit ribosomal protein S30e.
    
  0.689
LOC107718759
Small subunit ribosomal protein S30e.
    
  0.689
LOC107720608
Small subunit ribosomal protein S30e.
    
  0.689
mrpl2
39S ribosomal protein L2, mitochondrial.
   
 
 0.615
LOC107716411
Large subunit ribosomal protein L21e.
   
 
 0.603
LOC107705211
Large subunit ribosomal protein L21e.
   
 
 0.603
Babam1
BRISC and BRCA1-A complex member 1.
    
 0.575
LOC107747315
BRISC and BRCA1-A complex member 1-like.
    
 0.575
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.