STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000063078Calcium-independent phospholipase A2-gamma-like isoform X1. (569 aa)    
Predicted Functional Partners:
LOC107756768
Mediator of RNA polymerase II transcription subunit 14-like isoform X1.
    
 
 0.754
ENSSRHP00000070902
Mediator of RNA polymerase II transcription subunit 14-like.
    
 
 0.754
med17
Mediator of RNA polymerase II transcription subunit 17.
   
 
 0.723
ENSSRHP00000023599
Mediator of RNA polymerase II transcription subunit 17-like.
   
 
 0.723
LOC107752091
Mediator of RNA polymerase II transcription subunit 7-like.
   
 
 0.707
LOC107744582
Mediator of RNA polymerase II transcription subunit 7.
   
 
 0.707
LOC107711311
Mediator of RNA polymerase II transcription subunit 10.
   
 
 0.704
LOC107754807
Mediator of RNA polymerase II transcription subunit 10-like.
   
 
 0.704
LOC107758165
RDS/peripherin-like protein xRDS35 isoform X1.
      
 0.689
LOC107755654
Rod outer segment membrane protein 1.
      
 0.689
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.