STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107740444DIS3-like exonuclease 1 isoform X1. (1058 aa)    
Predicted Functional Partners:
exosc2
Exosome complex component RRP4.
   
 0.999
exosc9
Exosome complex component RRP45.
   
 0.993
ENSSRHP00000034692
Exosome complex component RRP45-like.
   
 0.993
exosc8
Exosome complex component RRP43.
   
 0.990
ENSSRHP00000089592
Exosome complex component RRP43-like.
   
 0.990
ENSSRHP00000023997
Exosome component 1.
   
 0.989
ENSSRHP00000090248
annotation not available
   
 0.989
ENSSRHP00000020287
Exosome complex component RRP46-like isoform X1.
   
 0.988
exosc4
Exosome complex component RRP41.
   
 0.988
ENSSRHP00000031918
Exosome complex component RRP40-like.
   
 0.988
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.