STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000069931Apolipoprotein Da, duplicate 1. (168 aa)    
Predicted Functional Partners:
ENSSRHP00000098983
Transthyretin-like.
  
 
 0.465
LOC107712388
Transthyretin-like.
  
 
 0.465
ENSSRHP00000101828
Complement component C8 gamma chain-like.
     
 0.447
LOC107714722
Apolipoprotein C-I-like.
   
  
 0.429
LOC107714079
Phosphatidylcholine-sterol acyltransferase-like.
   
  
 0.418
LOC107707505
Phosphatidylcholine-sterol acyltransferase-like.
   
  
 0.418
ENSSRHP00000055962
Zgc:153704.
   
 
 0.413
ENSSRHP00000065808
annotation not available
   
 
 0.413
ENSSRHP00000079002
Prostaglandin-H2 D-isomerase.
   
 
 0.413
ENSSRHP00000050290
Transcobalamin beta a.
      
 0.403
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.