STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000070757Autophagy-related protein 16-like isoform X1. (561 aa)    
Predicted Functional Partners:
atg12
Ubiquitin-like protein ATG12.
    
 0.998
Atg5
Autophagy-related protein 5.
   
 0.998
LOC107752093
Ubiquitin-like-conjugating enzyme ATG3.
   
 0.997
LOC107713119
Ubiquitin-like-conjugating enzyme ATG3 isoform X1.
   
 0.997
LOC107747900
WD repeat domain phosphoinositide-interacting protein 2 isoform X1.
   
 0.994
LOC107720064
WD repeat domain phosphoinositide-interacting protein 2-like.
   
 0.994
LOC107719990
WD repeat domain phosphoinositide-interacting protein 1-like isoform X1.
   
 0.993
LOC107721503
WD repeat domain phosphoinositide-interacting protein 1-like isoform X1.
   
 0.993
ENSSRHP00000051086
ATG5 autophagy related 5 homolog (S. cerevisiae).
   
 0.988
ENSSRHP00000085296
ATG12 autophagy related 12 homolog (S. cerevisiae).
    
 0.986
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.