STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000072018Anterior gradient protein 2 homolog. (171 aa)    
Predicted Functional Partners:
SPDEF
SAM pointed domain-containing Ets transcription factor-like.
   
  
 0.673
SPDEF-2
SAM pointed domain-containing Ets transcription factor-like.
   
  
 0.673
ENSSRHP00000088254
Endoplasmic reticulum resident protein 27-like.
    
 
 0.571
LOC107708488
Dystroglycan-like.
    
 
 0.568
DAG1
Dystroglycan-like.
    
 
 0.568
Tcf25
Transcription factor 25.
      
 0.520
LOC107718316
Anterior gradient protein 3-like.
  
   
0.510
LOC107754004
Anterior gradient protein 3-like.
  
   
0.509
LOC107739254
Neudesin-like.
      
 0.429
LOC107732830
Neudesin-like.
      
 0.429
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.