STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000072779Basic leucine zipper and W2 domains 1a. (427 aa)    
Predicted Functional Partners:
nif3l1
NIF3-like protein 1 isoform X1.
      
 0.688
ENSSRHP00000035391
Peptidylprolyl isomerase (cyclophilin)-like 3.
      
 0.529
ppil3
Peptidyl-prolyl cis-trans isomerase-like 3.
      
 0.529
LOC107749902
Beta-crystallin A2-like.
      
 0.491
RPL7A
Large subunit ribosomal protein L7Ae.
   
 
 0.455
RPL7A-2
Ribosomal protein L7a.
   
 
 0.455
ENSSRHP00000042620
Crystallin, beta A1b.
      
 0.428
ENSSRHP00000042945
Beta-crystallin A1-like isoform X1.
      
 0.428
LOC107713158
Beta-crystallin A1-like.
      
 0.428
LOC107706185
Transcription factor CP2 and related proteins.
      
 0.405
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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