STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107708679WW domain binding protein 1-like isoform X1. (338 aa)    
Predicted Functional Partners:
actr5
Actin-related protein 5.
    
 0.933
LOC107712098
RuvB-like protein 1 (pontin 52).
    
 0.842
LOC107721190
RuvB-like protein 1 (pontin 52).
    
 0.842
LOC107723410
INO80 complex subunit C-like.
    
 0.805
LOC107706244
INO80 complex subunit C-like.
    
 0.805
LOC107712365
RuvB-like protein 2.
    
 
 0.735
LOC107722783
RuvB-like protein 2.
    
 
 0.735
ENSSRHP00000009119
Actin-related protein 8-like.
    
 0.644
ENSSRHP00000043262
Actin-related protein 8.
    
 0.644
LOC107732023
Actin-like protein 6A.
    
 0.513
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.