STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000073951DDB1- and CUL4-associated factor 6-like. (871 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
    
 0.977
ENSSRHP00000094255
Damage-specific DNA binding protein 1.
    
 0.977
ENSSRHP00000064092
DNA damage-binding protein 2 isoform X1.
    
 0.871
LOC107708220
DNA damage-binding protein 2-like.
    
 0.871
ENSSRHP00000049809
DDB1- and CUL4-associated factor 4-like.
     
 0.863
Dcaf4
DDB1- and CUL4-associated factor 4.
     
 0.863
LOC107739884
DDB1- and CUL4-associated factor 5-like.
   
 
0.858
LOC107705431
DDB1- and CUL4-associated factor 5-like.
   
 
0.858
ENSSRHP00000009010
Cullin 4A.
   
 0.823
LOC107752014
Cullin-4B-like.
   
 0.823
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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