STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107727028Keratin, type I cytoskeletal 18. (431 aa)    
Predicted Functional Partners:
ENSSRHP00000032663
Protein unc-79 homolog.
   
 0.876
LOC107705699
Intermediate filament protein ON3.
   
0.626
LOC107727027
Intermediate filament protein ON3-like.
   
0.626
ENSSRHP00000003179
annotation not available
  
0.612
ENSSRHP00000046997
annotation not available
   
 0.550
ENSSRHP00000079218
Telomerase protein component 1-like isoform X1.
   
 0.550
ENSSRHP00000019417
Peptidyl-prolyl cis-trans isomerase A-like.
   
 0.531
ENSSRHP00000034840
annotation not available
   
 0.531
ENSSRHP00000034842
annotation not available
   
 0.531
ENSSRHP00000034845
annotation not available
   
 0.531
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.