STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000074918Lysyl oxidase-like 3a. (247 aa)    
Predicted Functional Partners:
ENSSRHP00000090572
RING finger protein 223-like.
   
 0.456
Arid4b
AT-rich interactive domain-containing protein 4B.
    
 0.441
ENSSRHP00000015866
AT-rich interactive domain-containing protein 4B-like.
    
 0.441
LOC107725617
AT-rich interactive domain-containing protein 4A-like.
    
 0.441
ENSSRHP00000086877
Translocase of outer mitochondrial membrane 20.
    
 0.441
ENSSRHP00000088237
AT-rich interactive domain-containing protein 4A-like isoform X1.
    
 0.441
ENSSRHP00000071557
annotation not available
   
 0.435
ENSSRHP00000071560
SMC5-SMC6 complex localization factor protein 1-like isoform X1.
   
 0.435
ENSSRHP00000059366
Histone H2A deubiquitinase MYSM1-like.
    
 0.413
ENSSRHP00000095660
Myb-like, SWIRM and MPN domains 1.
    
 0.413
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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