Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTH-2 | ENSSRHP00000007923 | ENSSRHP00000097336 | ENSSRHP00000007923 | Cystathionine gamma-lyase. | Methionine synthase reductase-like. | 0.720 |
CTH-2 | ENSSRHP00000010738 | ENSSRHP00000097336 | ENSSRHP00000010738 | Cystathionine gamma-lyase. | annotation not available | 0.720 |
CTH-2 | ENSSRHP00000013579 | ENSSRHP00000097336 | ENSSRHP00000013579 | Cystathionine gamma-lyase. | Methylenetetrahydrofolate reductase (NADPH). | 0.976 |
CTH-2 | ENSSRHP00000077889 | ENSSRHP00000097336 | ENSSRHP00000077889 | Cystathionine gamma-lyase. | Adenosylhomocysteinase A-like. | 0.962 |
CTH-2 | LOC107720052 | ENSSRHP00000097336 | ENSSRHP00000061800 | Cystathionine gamma-lyase. | Serine hydroxymethyltransferase, cytosolic-like. | 0.603 |
CTH-2 | LOC107729767 | ENSSRHP00000097336 | ENSSRHP00000052286 | Cystathionine gamma-lyase. | Adenosylhomocysteinase B isoform X1. | 0.962 |
CTH-2 | LOC107737723 | ENSSRHP00000097336 | ENSSRHP00000036870 | Cystathionine gamma-lyase. | Serine hydroxymethyltransferase, cytosolic-like. | 0.603 |
CTH-2 | LOC107758195 | ENSSRHP00000097336 | ENSSRHP00000019277 | Cystathionine gamma-lyase. | Serine hydroxymethyltransferase, mitochondrial-like isoform X1. | 0.603 |
CTH-2 | Mtr | ENSSRHP00000097336 | ENSSRHP00000075923 | Cystathionine gamma-lyase. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.995 |
CTH-2 | mthfr | ENSSRHP00000097336 | ENSSRHP00000036156 | Cystathionine gamma-lyase. | Methylenetetrahydrofolate reductase (NADPH). | 0.976 |
ENSSRHP00000007923 | CTH-2 | ENSSRHP00000007923 | ENSSRHP00000097336 | Methionine synthase reductase-like. | Cystathionine gamma-lyase. | 0.720 |
ENSSRHP00000007923 | ENSSRHP00000013579 | ENSSRHP00000007923 | ENSSRHP00000013579 | Methionine synthase reductase-like. | Methylenetetrahydrofolate reductase (NADPH). | 0.576 |
ENSSRHP00000007923 | LOC107720052 | ENSSRHP00000007923 | ENSSRHP00000061800 | Methionine synthase reductase-like. | Serine hydroxymethyltransferase, cytosolic-like. | 0.417 |
ENSSRHP00000007923 | LOC107737723 | ENSSRHP00000007923 | ENSSRHP00000036870 | Methionine synthase reductase-like. | Serine hydroxymethyltransferase, cytosolic-like. | 0.417 |
ENSSRHP00000007923 | LOC107758195 | ENSSRHP00000007923 | ENSSRHP00000019277 | Methionine synthase reductase-like. | Serine hydroxymethyltransferase, mitochondrial-like isoform X1. | 0.417 |
ENSSRHP00000007923 | Mtr | ENSSRHP00000007923 | ENSSRHP00000075923 | Methionine synthase reductase-like. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.972 |
ENSSRHP00000007923 | mthfr | ENSSRHP00000007923 | ENSSRHP00000036156 | Methionine synthase reductase-like. | Methylenetetrahydrofolate reductase (NADPH). | 0.576 |
ENSSRHP00000010738 | CTH-2 | ENSSRHP00000010738 | ENSSRHP00000097336 | annotation not available | Cystathionine gamma-lyase. | 0.720 |
ENSSRHP00000010738 | ENSSRHP00000013579 | ENSSRHP00000010738 | ENSSRHP00000013579 | annotation not available | Methylenetetrahydrofolate reductase (NADPH). | 0.576 |
ENSSRHP00000010738 | LOC107720052 | ENSSRHP00000010738 | ENSSRHP00000061800 | annotation not available | Serine hydroxymethyltransferase, cytosolic-like. | 0.417 |
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