STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSRHP00000076166OTU domain-containing protein 7A-like. (934 aa)    
Predicted Functional Partners:
LOC107741656
Polyubiquitin-C isoform X1.
   
 0.891
LOC107732947
UBX domain-containing protein 7-like.
   
 
 0.848
LOC107710610
UBX domain-containing protein 7-like.
   
 
 0.848
LOC107752103
Ubiquitin-small subunit ribosomal protein S27Ae.
   
  0.787
LOC107752103-2
ubiquitin-40S ribosomal protein S27a.
   
  0.787
uba52
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.766
ENSSRHP00000093444
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.766
LOC107749743
TNFAIP3-interacting protein 1-like isoform X1.
   
 0.706
LOC107750363
TNFAIP3-interacting protein 1-like isoform X1.
   
 0.706
ENSSRHP00000064961
Lymphotoxin alpha (TNF superfamily, member 1).
   
 0.656
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.