STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107745656Antigen KI-67-like isoform X1. (1928 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia group M protein.
    
 0.676
ENSSRHP00000010841
annotation not available
    
 0.598
ENSSRHP00000053603
annotation not available
    
 0.598
LOC107738090
Putative transcription factor Ovo-like 1.
    
 0.593
mus81
Crossover junction endonuclease MUS81 isoform X1.
    
 0.593
LOC107719932
Survival motor neuron protein 1-like isoform X1.
    
 0.582
LOC107746843
Survival motor neuron protein 1-like.
    
 0.582
LOC107754155
DNA polymerase delta catalytic subunit-like.
   
 0.580
LOC107731044
DNA polymerase delta catalytic subunit-like.
   
 0.580
LOC107711848
Probable ATP-dependent RNA helicase DDX20.
   
 0.551
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.