STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107754670Coiled-coil domain-containing protein 102A-like. (580 aa)    
Predicted Functional Partners:
ENSSRHP00000060910
Kinectin 1.
      
 0.611
ENSSRHP00000100946
annotation not available
      
 0.611
LOC107753254
Cdc42 effector protein 4-like.
      
 0.594
LOC107755444
Cdc42 effector protein 4-like.
      
 0.594
ENSSRHP00000037637
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
      
 0.573
LOC107713787
Succinate--hydroxymethylglutarate CoA-transferase-like isoform X1.
      
 0.526
LOC107734384
Succinate--hydroxymethylglutarate CoA-transferase-like.
      
 0.526
LOC107754669
Docking protein 4-like.
      
 0.518
DOK4
Docking protein 4-like isoform X1.
      
 0.518
ENSSRHP00000012230
Nuclear pore complex protein Nup107-like.
      
 0.514
Your Current Organism:
Sinocyclocheilus rhinocerous
NCBI taxonomy Id: 307959
Other names: S. rhinocerous
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.